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strains
Strains
As of 2022, we know of ~200 strains of Agrobacterium. We hope to maintain information, references, and availability on this page.
| Strain | Chromosomal Background | Ti/Ri Plasmid | Marker genes | Oncogenecity | Opine Utilization | Opine | Source | Reference | ||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT4 | pAt-542(a,c) | pTi-542 | + | - | J. A. Lippincott | |||||||
| A543 | pTi-542 | + | AT4 in planta w/ A136 | |||||||||
| AG19 | pAt-AG19(a,b) | J. A. Lippincott | ||||||||||
| AG19 Tr | pAt-AG19b | A200 with plasmid of AG19 | ||||||||||
| T10/73A | + | + | Nopaline | L. W. Moore | ||||||||
| A532 | A200 with plasmid from T10/73A | |||||||||||
| Chry5 | Succinamopine | Chrysanthemum morifolium Ram | R. E. Stall, University of Florida | |||||||||
| Bo542 | Succinamopine | Dahlia | R. O. Morris, University of Missouri | |||||||||
| A281 | A136 | pTiBo542 | rif | + | + | Succinamopine | pTiBo542 in A136 | L. D. Owens | ||||
| AT-181 | Succinamopine | Dahlia | R. N, Goodman, University of Missouri | |||||||||
| C58 | Nopaline | Prunus (cherry) | J. A. Lippincott, Northwestern University | R Dickey | ||||||||
| T37 | Nopaline | Juglans | E. W. Nester, University of Washington | |||||||||
| A208 | A136 | pTiT37 | Nopaline | R. O. Morris, University of Missouri | ||||||||
| Ach5 | Octopine | Achillea millefolium L. | J. A. Lippincott, Northwestern University | |||||||||
| CG1C | Octopine | Pyrus communis L. | L. Moore, Oregon State University | |||||||||
| B6 | Octopine | Malus domestica Borkh | A. G. Matthysse, University of North Carolina | |||||||||
| NT-1(B6) | NT-1 | pTiB6 | Octopine | W. B. Gurley, University of Florida | ||||||||
| A6 | Octopine | Rubus occidentalis L. | E. W. Nester, University of Washington | |||||||||
| A348 | A136 | pTiA6 | Octopine | E. W. Nester, University of Washington | ||||||||
| B2A | Octopine | Lycopersicon esculentum Mill | R. O. Morris, University of Missouri | |||||||||
| 15955 | Octopine | W. B. Gurley, University of Florida | ||||||||||
| NT-1(15995) | NT-1 | pTi15955 | Octopine | W. B. Gurley, University of Florida | ||||||||
| S1005 | Octopine | W. B. Gurley, University of Florida | ||||||||||
| Ag63 | Octopine | Vitis vinifera L. | R. N, Goodman, University of Missouri | |||||||||
| Tm-4 | Octopine | Vitis vinifera L. | E. Szegedi, Institute for Viticulture, Hungary | |||||||||
| AT-1 | Nopaline | Vitis vinifera L. | R. N, Goodman, University of Missouri | |||||||||
| 338 | L. D. Owens, USDA, Beltsville | |||||||||||
| B6 | Apple | |||||||||||
| Ag5 | Peach | |||||||||||
| B234 | ||||||||||||
| K27 | Poplar | |||||||||||
| Ag57 | Vitis vinifera L. | |||||||||||
| CG64 | Vitis vinifera L. | |||||||||||
| A136 | C58 | pTiC58 | ||||||||||
| NT-1 | C58 | pTiC58 | ||||||||||
| NT1-A1 | NTI (pAgk84::Tn5) | 3 | ||||||||||
| LBA4404 | TiAch5 | pAL4404 | rif, Spec and Strep | Octopine | ||||||||
| GV2260 | C58 | pGV2260 (pTiB6S3deltaT-DNA) | rif, carb | Octopine | 32 | |||||||
| C58C1 | C58 | Cured | Nopaline | 33 | ||||||||
| GV3100 | C58 | Cured | Nopaline | 34 | ||||||||
| A136 | C58 | Cured | rif and nal | Nopaline | 35 | |||||||
| GV3101 | C58 | Cured | rif | Nopaline | 34 | |||||||
| GV3850 | C58 | pGV3850 (pTiC58deltaonc.genes) | rif, carb | Nopaline | 36 | |||||||
| GV3101::pMP90 | C58 | pMP90 (pTiC58deltaT-DNA) | rif, gent | Nopaline | 6 | |||||||
| GV3101::pMP90RK | C58 | pMP90RK (pTiC58CdeltaT-DNA) | rif, gent and kan | Nopaline | 6 | |||||||
| EHA101 | C58 | pEHA101 (pTiBo542deltaT-DNA) | rif, kan | Nopaline | 37 | |||||||
| EHA105 | C58 | pEHA105 (pTiBo542deltaT-DNA) | rif | Succinamopine | 38 | |||||||
| AGL-1 | C58, RecA | pTiBo542deltaT-DNA | rif, carb | Succinamopine | 39 | |||||||
| B6 | Apple gall, Iowa | Kersters 1973 | ||||||||||
| B6-806 | Derived from B6 | Beardsley 1955 | ||||||||||
| B6-V87 | Derived from B6 | LW Moore, personal communication | ||||||||||
| 209 | Tomato gall, California | JE DeVay, personal communication | ||||||||||
| 15955 | Sibling isolate of 209 | JE DeVay, personal communication | ||||||||||
| A6 | Black Raspeberry gall, Iowa | AC Hildebrandt, personal communication; Hendrickson 1934 | ||||||||||
| 5GlyFeAvir | Derived from A6 after glycine attenutation | AC Braun, personal communication | ||||||||||
| B2A | Derived from B2, isolated from tomato gall, Iowa | Stonier 1960 | ||||||||||
| NCPPB 1001 | Vitis Vinifera gall, Rumania | Kersters 1973 | ||||||||||
| C58 | Cherry gall, New York | R Dickey, personal communication | ||||||||||
| 27912 or ID135 | Soil under infected Peach Tree | Kado 1972 | ||||||||||
| IIB and IIBV7 | Chrysantheum all, Germany | AC Braun, personal communication | ||||||||||
| T37 | Walnut gall, California | Hendrickson 1934 | ||||||||||
| H100 | Hops gall, Wisconsin | T Stonier 1960 | ||||||||||
| 27 | Poplar gall, Scotland | Kean 1970 | ||||||||||
| 223 | Unknown, New Zealand | Kean 1970 | ||||||||||
| 84 | Soil under infected Peach Tree, Australia | New and Kerr 1972 | ||||||||||
| EU6 | Euonymus gall, Conneticut | AC Braun, personal communication | ||||||||||
| AT181 | Poplar gall, Washington DC | AC Braun, personal communication | ||||||||||
| Bo542 | Dahlia gall, Germany | G Melchers, personal communication | ||||||||||
| AT4 | Dahlia gall, Germany; orginially same strain as Bo542 | Lippincott 1973 and records of Biologische Bundeanshalt, Berlin | ||||||||||
| AG19 | Grape gall, Greece | JA Lippincott, personal communication | ||||||||||
| T10/73A | Rose gall, Oregon | LW Moore, personal communication | ||||||||||
| IIB | pAt-IIBa/pAt-IIBb | - | - | AC Braun | ||||||||
| IIBV7 | pTi-IIBV7 | + | + | JA Lippincott | ||||||||
| T37 | pTi-T37/pAt-T37 | + | + | JA Lippincott | ||||||||
| A208 | pTi-T37 | + | + | Conjugation in planta of T37 with A136 and selection for oncogenicity | ||||||||
| H100 | pTi-H100/pAT-H100 | + | + | AC Braun | ||||||||
| 27 | pAT-27/pTi-27 | + | + | A Kerr | ||||||||
| A-178 | pTi-T37 | + | + | Conjugation in planta of 27 with A136 and selection for oncogenicity | ||||||||
| 223 | pAt-223/pTi-223 | + | + | NCPPB | ||||||||
| A203 | pTi-223 | + | + | Conjugation in planta of 223 with A136 and selection for oncogenicity | ||||||||
| 84 | pAt-84a/pAt-84b | - | + | A Kerr | ||||||||
| A323 | pAt-84b | - | + | Transformation by plasmid from 84 and selection for nop | ||||||||
| EU6 | pTi-EU6/pAt-EU6 | + | + | AC Braun | ||||||||
| A518 | pTi-EU6 | + | + | Transformation of A200 by plasmid from EU6 and selection for nop | ||||||||
| AT181 | pTi-AT181/pAt-AT181 | + | + | JA Lippincott | ||||||||
| A519 | pAt-AT181 | + | + | Transformation of A200 by plasmid from AT181 and selection for nop | ||||||||
| Bo542 | pAt-542a,b,c | + | - | G Melchers | ||||||||
| A281 | pTi-542 | + | - | Congugation in planta of Bo542 with A136 and selection for oncogenicity | ||||||||
| B6-806 | pTi-B6-806/pAt-B6-806 | + | - | JA Lippincott | ||||||||
| A217 | pAt-B6-806 | - | - | Treatment of B6-806with nitrosogidine and selection for oct | ||||||||
| A277 | pTi-B6-806 | + | - | Congugation in planta of B6-806 with A136 and selection for oncogenicity | ||||||||
| B6 | pTi-B6-T/pAt-B6-T | + | - | J Tourneur | ||||||||
| B6M5 | pAt-B6-T | - | - | Spontaneous variety of B6 | J Touneur | |||||||
| A552 | pTi-B6-T | + | - | Transformation of A200 by plasmid from B6 and selection for oct | ||||||||
| B6-V87 | pTi-B6 | + | - | LW Moore | ||||||||
| 209 | pTi-15955 | + | - | C Rogler | ||||||||
| A6 | pTi-A6S | + | - | RA Schilperoort | ||||||||
| A6NC | pTi-A6S | + | - | Spontaneous nonclumping variety of A6, SKF | ||||||||
| A6 | pTi-A6M | + | - | A Matthysse | ||||||||
| 5GlyFeAvir | pTi-A6 | + | - | glycine attenuated A6 | AC Braun | |||||||
| B2A | pTi-B2A | + | - | C Pootjes | ||||||||
| 15955 | pTi-15955 | + | - | ATCC | ||||||||
| NCPPB 1001 | pTi-1001 | + | - | A Kerr | ||||||||
| C58 | pTi-C58 | + | + | R Hamilton | ||||||||
| A174 | pTi-C58 | + | + | Conjugation in planta of C58 with A136 and selection for oncogenitcity | ||||||||
| A321 | pTi-C58 | + | + | Transformation of A200 by plasmid |
/home/agrokwev/public_html/data/pages/strains.txt · Last modified: 2022/02/12 22:44 by moth
